Bytes Europe<p>Profiles of antibiotic resistome risk in diverse water environments <a href="https://www.byteseu.com/787188/" rel="nofollow noopener noreferrer" translate="no" target="_blank"><span class="invisible">https://www.</span><span class="">byteseu.com/787188/</span><span class="invisible"></span></a> <a href="https://pubeurope.com/tags/EarthSciences" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>EarthSciences</span></a> <a href="https://pubeurope.com/tags/environment" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>environment</span></a> <a href="https://pubeurope.com/tags/EnvironmentalMonitoring" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>EnvironmentalMonitoring</span></a> <a href="https://pubeurope.com/tags/General" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>General</span></a> <a href="https://pubeurope.com/tags/MicrobialEcology" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>MicrobialEcology</span></a></p>
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#MicrobialEcology
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NIOO-KNAW<p>New publication: Domesticated <a href="https://social.edu.nl/tags/rice" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>rice</span></a> alters the <a href="https://social.edu.nl/tags/rhizosphere" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>rhizosphere</span></a> <a href="https://social.edu.nl/tags/microbiome" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>microbiome</span></a>, reducing <a href="https://social.edu.nl/tags/nitrogen" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>nitrogen</span></a> fixation and increasing nitrous oxide emissions. <a href="https://social.edu.nl/tags/agroecology" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>agroecology</span></a> <a href="https://social.edu.nl/tags/sustainability" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>sustainability</span></a> <a href="https://social.edu.nl/tags/microbialecology" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>microbialecology</span></a><br><a href="https://doi.org/10.1038/s41467-025-57213-x" rel="nofollow noopener noreferrer" translate="no" target="_blank"><span class="invisible">https://</span><span class="ellipsis">doi.org/10.1038/s41467-025-572</span><span class="invisible">13-x</span></a></p>
NIOO-KNAW<p>New publication: Harnessing the synergy of Urochloa brizantha and <a href="https://social.edu.nl/tags/Amazonian" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>Amazonian</span></a> Dark Earth <a href="https://social.edu.nl/tags/microbiomes" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>microbiomes</span></a> for enhanced <a href="https://social.edu.nl/tags/pasture" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>pasture</span></a> recovery. <a href="https://social.edu.nl/tags/ecologicalrestoration" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>ecologicalrestoration</span></a> <a href="https://social.edu.nl/tags/biodiversity" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>biodiversity</span></a> <a href="https://social.edu.nl/tags/sustainability" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>sustainability</span></a> <a href="https://social.edu.nl/tags/microbialecology" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>microbialecology</span></a> <a href="https://social.edu.nl/tags/soilscience" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>soilscience</span></a><br><a href="https://doi.org/10.1186/s12866-024-03741-3" rel="nofollow noopener noreferrer" translate="no" target="_blank"><span class="invisible">https://</span><span class="ellipsis">doi.org/10.1186/s12866-024-037</span><span class="invisible">41-3</span></a></p>
michael<p>17-Oct-2024<br><a href="https://mastodon.social/tags/Bacteria" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>Bacteria</span></a> thrive by playing nice before going their own way<br>Dartmouth study tackles question of how multiple bacterial species coexist in <a href="https://mastodon.social/tags/biofilms" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>biofilms</span></a></p><p><a href="https://www.eurekalert.org/news-releases/1061367" rel="nofollow noopener noreferrer" translate="no" target="_blank"><span class="invisible">https://www.</span><span class="ellipsis">eurekalert.org/news-releases/1</span><span class="invisible">061367</span></a> <a href="https://mastodon.social/tags/science" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>science</span></a> <a href="https://mastodon.social/tags/ecology" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>ecology</span></a> <a href="https://mastodon.social/tags/MicrobialEcology" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>MicrobialEcology</span></a></p>
michael<p>17-Oct-2024<br>Identifying the genes that <a href="https://mastodon.social/tags/viruses" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>viruses</span></a> ‘steal’ from ocean <a href="https://mastodon.social/tags/microbes" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>microbes</span></a><br>Study suggests viruses reprogram at least 1/3 of metabolic processes</p><p><a href="https://www.eurekalert.org/news-releases/1061703" rel="nofollow noopener noreferrer" translate="no" target="_blank"><span class="invisible">https://www.</span><span class="ellipsis">eurekalert.org/news-releases/1</span><span class="invisible">061703</span></a> <a href="https://mastodon.social/tags/science" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>science</span></a> <a href="https://mastodon.social/tags/ecology" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>ecology</span></a> <a href="https://mastodon.social/tags/MicrobialEcology" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>MicrobialEcology</span></a> <a href="https://mastodon.social/tags/genome" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>genome</span></a></p>
Teresita Porter 🙋🏻♀️<p>Phylogenetic reconciliation: making the most of genomes to understand microbial ecology and evolution</p><p><a href="https://doi.org/10.1093/ismejo/wrae129" rel="nofollow noopener noreferrer" translate="no" target="_blank"><span class="invisible">https://</span><span class="">doi.org/10.1093/ismejo/wrae129</span><span class="invisible"></span></a></p><p><a href="https://ecoevo.social/tags/phylogenetics" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>phylogenetics</span></a> <a href="https://ecoevo.social/tags/phylogenomics" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>phylogenomics</span></a> <a href="https://ecoevo.social/tags/MicrobialEcology" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>MicrobialEcology</span></a> <a href="https://ecoevo.social/tags/evolution" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>evolution</span></a></p>
James Fellows Yates<p>I'm looking forward to the <span class="h-card" translate="no"><a href="https://mstdn.science/@nf_core" class="u-url mention" rel="nofollow noopener noreferrer" target="_blank">@<span>nf_core</span></a></span> hackathon and <a href="https://genomic.social/tags/Nextflow" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>Nextflow</span></a> Summit in Barcelona in October!</p><p>Is anyone here on Mastodon coming as well (or joining remotely)? </p><p>I'll be giving a talk during the summit giving an overview of the <a href="https://genomic.social/tags/metagenomic" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>metagenomic</span></a> and <a href="https://genomic.social/tags/MicrobialEcology" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>MicrobialEcology</span></a> pipeline 'offerings' of <a href="https://genomic.social/tags/nfcore" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>nfcore</span></a> :)</p><p>If you're interested, more info here: <a href="https://summit.nextflow.io/2024/barcelona/" rel="nofollow noopener noreferrer" translate="no" target="_blank"><span class="invisible">https://</span><span class="ellipsis">summit.nextflow.io/2024/barcel</span><span class="invisible">ona/</span></a></p><p><a href="https://genomic.social/tags/bioinformatics" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>bioinformatics</span></a></p>
Lukas VFN 🇪🇺<p>Soheil Neshat at <a href="https://scholar.social/tags/ISME19" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>ISME19</span></a>: "...so to introduce MicroEcoTools, which we published 2 hours ago..." =D</p><p><a href="https://scholar.social/tags/MicroEcoTools" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>MicroEcoTools</span></a>: an <a href="https://scholar.social/tags/Rstats" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>Rstats</span></a> package for comprehensive theoretical <a href="https://scholar.social/tags/MicrobialEcology" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>MicrobialEcology</span></a> analysis <a href="https://www.biorxiv.org/content/10.1101/2024.08.19.608598v1" rel="nofollow noopener noreferrer" translate="no" target="_blank"><span class="invisible">https://www.</span><span class="ellipsis">biorxiv.org/content/10.1101/20</span><span class="invisible">24.08.19.608598v1</span></a> <a href="https://scholar.social/tags/ecology" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>ecology</span></a> <a href="https://scholar.social/tags/microbes" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>microbes</span></a> <a href="https://scholar.social/tags/microbiology" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>microbiology</span></a> <span class="h-card" translate="no"><a href="https://biologists.social/@biorxivpreprint" class="u-url mention" rel="nofollow noopener noreferrer" target="_blank">@<span>biorxivpreprint</span></a></span> <span class="h-card" translate="no"><a href="https://wisskomm.social/@ISMEmicrobes" class="u-url mention" rel="nofollow noopener noreferrer" target="_blank">@<span>ISMEmicrobes</span></a></span></p>
Teresita Porter 🙋🏻♀️<p>Phylogenetic reconciliation: making the most of genomes to understand microbial ecology and evolution</p><p><a href="https://doi.org/10.1093/ismejo/wrae129" rel="nofollow noopener noreferrer" translate="no" target="_blank"><span class="invisible">https://</span><span class="">doi.org/10.1093/ismejo/wrae129</span><span class="invisible"></span></a></p><p><a href="https://ecoevo.social/tags/phylogenetics" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>phylogenetics</span></a> <a href="https://ecoevo.social/tags/MicrobialEcology" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>MicrobialEcology</span></a> <a href="https://ecoevo.social/tags/Evolution" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>Evolution</span></a></p>
michael<p>11-JUL-2024<br>Researchers develop a way to make lifesaving <a href="https://mastodon.social/tags/phages" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>phages</span></a> accessible, transportable and much easier to use<br>When <a href="https://mastodon.social/tags/antibiotics" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>antibiotics</span></a> fail, <a href="https://mastodon.social/tags/bacteriophages" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>bacteriophages</span></a> can often save lives, but determining which ones will work and sourcing them is haphazard</p><p><a href="https://www.eurekalert.org/news-releases/1051090" rel="nofollow noopener noreferrer" translate="no" target="_blank"><span class="invisible">https://www.</span><span class="ellipsis">eurekalert.org/news-releases/1</span><span class="invisible">051090</span></a> <br><a href="https://mastodon.social/tags/science" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>science</span></a> <a href="https://mastodon.social/tags/PhageTherapy" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>PhageTherapy</span></a> <a href="https://mastodon.social/tags/bacteria" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>bacteria</span></a> <a href="https://mastodon.social/tags/MicrobialEcology" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>MicrobialEcology</span></a> <a href="https://mastodon.social/tags/medicine" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>medicine</span></a></p>
Jim Downie<p>Reposting my <a href="https://mstdn.science/tags/introduction" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>introduction</span></a> so I can pin it - I'm a postdoctoral researcher doing <a href="https://mstdn.science/tags/MicrobialEcology" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>MicrobialEcology</span></a> at Bangor University.</p><p>I'm interested in the interactions between <a href="https://mstdn.science/tags/plants" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>plants</span></a> and their associated <a href="https://mstdn.science/tags/microorganisms" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>microorganisms</span></a>, particularly how they affect health outcomes in host plants, and how microbial communities differ on hosts across landscapes. I'm also interested in the question of how to accurately quantify and model microbial communities.</p><p>Keen on <a href="https://mstdn.science/tags/rstats" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>rstats</span></a>, <a href="https://mstdn.science/tags/OpenScience" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>OpenScience</span></a>, <a href="https://mstdn.science/tags/BayesianStatistics" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>BayesianStatistics</span></a>, <a href="https://mstdn.science/tags/Stan" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>Stan</span></a></p>
Matthias C. Rillig<p>Here is my <a href="https://mastodon.online/tags/Introduction" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>Introduction</span></a> for <a href="https://mastodon.online/tags/ScienceMastodon" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>ScienceMastodon</span></a> </p><p>I am ecologist interested in soil biodiversity and global change.</p><p>We work on many factors of global change, including: <a href="https://mastodon.online/tags/climatechange" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>climatechange</span></a> <a href="https://mastodon.online/tags/microplastics" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>microplastics</span></a> <a href="https://mastodon.online/tags/pollution" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>pollution</span></a> </p><p>Our focal organisms are <a href="https://mastodon.online/tags/fungi" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>fungi</span></a> and we work on saprobic fungi as well as on fungi forming <a href="https://mastodon.online/tags/mycorrhiza" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>mycorrhiza</span></a> </p><p><a href="https://mastodon.online/tags/SoilEcology" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>SoilEcology</span></a> <a href="https://mastodon.online/tags/environment" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>environment</span></a> <a href="https://mastodon.online/tags/SoilBiodiversity" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>SoilBiodiversity</span></a> <a href="https://mastodon.online/tags/Berlin" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>Berlin</span></a> <a href="https://mastodon.online/tags/microbiology" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>microbiology</span></a> <a href="https://mastodon.online/tags/MicrobialEcology" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>MicrobialEcology</span></a> <a href="https://mastodon.online/tags/soil" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>soil</span></a> <a href="https://mastodon.online/tags/GlobalChange" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>GlobalChange</span></a> <a href="https://mastodon.online/tags/ecology" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>ecology</span></a> <a href="https://mastodon.online/tags/EnvironmentalScience" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>EnvironmentalScience</span></a> <a href="https://mastodon.online/tags/pesticides" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>pesticides</span></a> <a href="https://mastodon.online/tags/GlobalWarming" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>GlobalWarming</span></a> <a href="https://mastodon.online/tags/PlasticPollution" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>PlasticPollution</span></a></p>
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