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#datavis

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Dr. Verónica Espinoza<p>✨Retina: A free open source web application to share network visualizations online. </p><p>"Retina is developed by OuestWare for Tommaso Venturini from CNRS Center Internet et Société. It is released under the GNU GPLv3 license. Retina was created on January 12, 2022"</p><p>👉Check out all the details about this tool and a tutorial I’ve prepared on my Medium! (Aug, 2025)<br><a href="https://medium.com/@vespinozag/retina-a-free-open-source-web-application-to-share-network-visualizations-online-9fe11454ddc1" rel="nofollow noopener" translate="no" target="_blank"><span class="invisible">https://</span><span class="ellipsis">medium.com/@vespinozag/retina-</span><span class="invisible">a-free-open-source-web-application-to-share-network-visualizations-online-9fe11454ddc1</span></a></p><p>cc <span class="h-card" translate="no"><a href="https://vis.social/@jacomyal" class="u-url mention" rel="nofollow noopener" target="_blank">@<span>jacomyal</span></a></span> <span class="h-card" translate="no"><a href="https://vis.social/@Gephi" class="u-url mention" rel="nofollow noopener" target="_blank">@<span>Gephi</span></a></span> <span class="h-card" translate="no"><a href="https://piaille.fr/@paulanomalie" class="u-url mention" rel="nofollow noopener" target="_blank">@<span>paulanomalie</span></a></span> <span class="h-card" translate="no"><a href="https://mastodon.social/@ouestware" class="u-url mention" rel="nofollow noopener" target="_blank">@<span>ouestware</span></a></span> </p><p><a href="https://mastodon.social/tags/Networkscience" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>Networkscience</span></a> <a href="https://mastodon.social/tags/gephi" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>gephi</span></a> <a href="https://mastodon.social/tags/datavis" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>datavis</span></a></p>
Marian Dörk<p>interesting developments over at <span class="h-card" translate="no"><a href="https://vis.social/@observablehq" class="u-url mention" rel="nofollow noopener" target="_blank">@<span>observablehq</span></a></span>! </p><p><a href="https://observablehq.com/notebook-kit/" rel="nofollow noopener" translate="no" target="_blank"><span class="invisible">https://</span><span class="">observablehq.com/notebook-kit/</span><span class="invisible"></span></a></p><p>- open file format for Observable notebooks<br>- support for static site generation<br>- native macOS app for editing local notebooks</p><p>this ticks a lot of boxes on my end. very exciting! can't wait to try this</p><p><a href="https://vis.social/tags/datavis" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>datavis</span></a> <a href="https://vis.social/tags/staticweb" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>staticweb</span></a> <a href="https://vis.social/tags/openstandards" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>openstandards</span></a></p>
Marian Dörk<p>Revisiting Data by Design:&nbsp;An Interactive History of Data Visualization by <span class="h-card" translate="no"><a href="https://dair-community.social/@laurenfklein" class="u-url mention" rel="nofollow noopener" target="_blank">@<span>laurenfklein</span></a></span> and the team at Emory University. Such a neat way to present the history of data visualization: <a href="https://dev.dataxdesign.io" rel="nofollow noopener" translate="no" target="_blank"><span class="invisible">https://</span><span class="">dev.dataxdesign.io</span><span class="invisible"></span></a></p><p>While the book is forthcoming, the website already offers an impressive investigation into the contexts of historic maps and charts — featuring annotated originals and interactive recreations.</p><p><a href="https://vis.social/tags/DataVis" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>DataVis</span></a> <a href="https://vis.social/tags/DigitalHumanities" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>DigitalHumanities</span></a> <a href="https://vis.social/tags/InterfaceDesign" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>InterfaceDesign</span></a> <a href="https://vis.social/tags/CriticalDataVis" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>CriticalDataVis</span></a> <a href="https://vis.social/tags/History" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>History</span></a> <a href="https://vis.social/tags/ScrollyTelling" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>ScrollyTelling</span></a> <a href="https://vis.social/tags/Literacy" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>Literacy</span></a></p>
Marian Dörk<p>Part I of CG&amp;A SI on <a href="https://vis.social/tags/CriticalDataVis" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>CriticalDataVis</span></a> is out <a href="https://www.computer.org/csdl/magazine/cg/2025/03" rel="nofollow noopener" translate="no" target="_blank"><span class="invisible">https://www.</span><span class="ellipsis">computer.org/csdl/magazine/cg/</span><span class="invisible">2025/03</span></a> and we contribute two papers on interactivity and storytelling in <a href="https://vis.social/tags/DataVis" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>DataVis</span></a>:</p><p>Toward Collective Storytelling: Investigating Audience Annotations in Data Visualizations<br><a href="https://doi.org/10.1109/MCG.2025.3547944" rel="nofollow noopener" translate="no" target="_blank"><span class="invisible">https://</span><span class="ellipsis">doi.org/10.1109/MCG.2025.35479</span><span class="invisible">44</span></a></p><p>Critical Interactivity: Exploration and Narration in Data Visualization <br><a href="https://doi.org/10.1109/mcg.2025.3544684" rel="nofollow noopener" translate="no" target="_blank"><span class="invisible">https://</span><span class="ellipsis">doi.org/10.1109/mcg.2025.35446</span><span class="invisible">84</span></a></p><p>Big thanks to editors Georgia Panagiotidou <span class="h-card" translate="no"><a href="https://hci.social/@mcnuttandrew" class="u-url mention" rel="nofollow noopener" target="_blank">@<span>mcnuttandrew</span></a></span> <span class="h-card" translate="no"><a href="https://mastodon.social/@gotdairyya" class="u-url mention" rel="nofollow noopener" target="_blank">@<span>gotdairyya</span></a></span> <span class="h-card" translate="no"><a href="https://vis.social/@nicolehengesbach" class="u-url mention" rel="nofollow noopener" target="_blank">@<span>nicolehengesbach</span></a></span> Miriah Meyer!</p><p><a href="https://vis.social/tags/FHPotsdam" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>FHPotsdam</span></a> <a href="https://vis.social/tags/OpenAccess" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>OpenAccess</span></a> <a href="https://vis.social/tags/InterfaceDesign" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>InterfaceDesign</span></a></p>
sport of sacred spherical cows<p>Raj's dashboard, updated Sunday, shows PQ.2 as standout child of Nimbus NB.1.8.1 / PQ; Stratus XFG overtaken by child XFG.2; and LP.8.1 long ago overshadowed by LP.8.1.1/ NY.</p><p>GISAID data for the most recent fortnight is dominated by submissions from New York (with all of 58 sequences), followed by Florida (with 17).<br> <br><a href="https://hcommons.social/tags/CDC" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>CDC</span></a>'s most recent Friday dataset, updated Tuesday June 24, showed Nimbus taking plurality, with Stratus XFG family also gaining share.</p><p>FDA vaccine target LP.8.1, dominant since March, plateaued in April. June saw Nimbus NB.1.8.1 / PQ, scion of "razor-blade throat" XDV, push LP.8.1 out of majority.</p><p>❖ <a href="https://hcommons.social/tags/ThisIsOurPolio" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>ThisIsOurPolio</span></a> <a href="https://hcommons.social/tags/variants" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>variants</span></a> <a href="https://hcommons.social/tags/CovidIsNotOver" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>CovidIsNotOver</span></a> <a href="https://hcommons.social/tags/dataviz" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>dataviz</span></a> <a href="https://hcommons.social/tags/datavis" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>datavis</span></a></p>
DAVIF<p>Inwiefern unterscheiden sich filmhistorische Datenbanken im Hinblick auf die Sichtbarkeit von Filmpionierinnen?</p><p>Dieser Frage haben wir uns gemeinsam mit <span class="h-card" translate="no"><a href="https://vis.social/@mschories" class="u-url mention" rel="nofollow noopener" target="_blank">@<span>mschories</span></a></span> gewidmet und die Daten unserer Kooperationspartner*innen DFF - Deutsches Filminstitut &amp; Filmmuseum und Women Film Pioneers Project mit Hilfe von explorativen Datenvisualisierungen untersucht 🎬 🔍✨ </p><p>Die Ergebnisse sind nun hier zu finden:<br><a href="https://davif-datavis.online.uni-marburg.de/" rel="nofollow noopener" translate="no" target="_blank"><span class="invisible">https://</span><span class="ellipsis">davif-datavis.online.uni-marbu</span><span class="invisible">rg.de/</span></a> </p><p><a href="https://fedihum.org/tags/DAVIF" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>DAVIF</span></a> <a href="https://fedihum.org/tags/FrauenUndFilm" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>FrauenUndFilm</span></a> <a href="https://fedihum.org/tags/DataVis" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>DataVis</span></a> <a href="https://fedihum.org/tags/DigitaleFilmgeschichte" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>DigitaleFilmgeschichte</span></a> <a href="https://fedihum.org/tags/DH" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>DH</span></a></p>
CIM Warwick<p>We are <a href="https://fediscience.org/tags/recruiting" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>recruiting</span></a>. We are looking for a new Research Software Engineer to join the team for our new doctoral training centre in data visualisation, DIVERSE CDT. </p><p>🗓️ Deadline July 29th<br>Fixed Term Contract until 30th September 2033, 0.5FTE<br>£35,116 - £45,413 per annum pro rata </p><p>+info and application:</p><p>ℹ️ <a href="https://warwick-careers.tal.net/vx/lang-en-GB/mobile-0/appcentre-1/brand-4/user-11595/xf-a4177287fbf6/candidate/so/pm/1/pl/3/opp/3018-Research-Software-Engineer-EPSRC-DIVERSE-CDT-110339-0725/en-GB" rel="nofollow noopener" translate="no" target="_blank"><span class="invisible">https://</span><span class="ellipsis">warwick-careers.tal.net/vx/lan</span><span class="invisible">g-en-GB/mobile-0/appcentre-1/brand-4/user-11595/xf-a4177287fbf6/candidate/so/pm/1/pl/3/opp/3018-Research-Software-Engineer-EPSRC-DIVERSE-CDT-110339-0725/en-GB</span></a></p><p><a href="https://fediscience.org/tags/job" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>job</span></a> <a href="https://fediscience.org/tags/hiring" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>hiring</span></a> <a href="https://fediscience.org/tags/RSE" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>RSE</span></a> <a href="https://fediscience.org/tags/researchSoftwareEngineer" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>researchSoftwareEngineer</span></a> <a href="https://fediscience.org/tags/DataVis" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>DataVis</span></a> <a href="https://fediscience.org/tags/DataViz" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>DataViz</span></a></p>
UCLAB Potsdam<p>We're excited to be in Lisbon for <a href="https://vis.social/tags/DH2025" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>DH2025</span></a> where we'll be sharing our latest work at the intersection of <a href="https://vis.social/tags/DigitalHumanities" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>DigitalHumanities</span></a> and <a href="https://vis.social/tags/DataVis" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>DataVis</span></a>:</p><p>👗 »3D Stories: Bringing Cultural Heritage Objects to Life«<br>try prototype → <a href="https://uclab.fh-potsdam.de/3dstories/" rel="nofollow noopener" translate="no" target="_blank"><span class="invisible">https://</span><span class="">uclab.fh-potsdam.de/3dstories/</span><span class="invisible"></span></a></p><p>🖼️ »Laying it all out: Collage as a co-creative method for designing collection interfaces«<br>see collages → <a href="https://uclab.fh-potsdam.de/collagingworkshop/" rel="nofollow noopener" translate="no" target="_blank"><span class="invisible">https://</span><span class="ellipsis">uclab.fh-potsdam.de/collagingw</span><span class="invisible">orkshop/</span></a></p><p>📔 »Stereoscopic Journals: An archive interface entangling diary segments with photo series«<br>try prototype → <a href="http://stereoscopicjournals.it" rel="nofollow noopener" translate="no" target="_blank"><span class="invisible">http://</span><span class="">stereoscopicjournals.it</span><span class="invisible"></span></a></p>
sport of sacred spherical cows<p>Raj's dashboard, updated this morning, shows PQ.2 as standout child of Nimbus NB.1.8.1 / PQ; Stratus XFG overtaken by child XFG.2; and LP.8.1 long ago overshadowed by LP.8.1.1/ NY.</p><p>FDA vaccine target LP.8.1, dominant since March, plateaued in April. June saw Nimbus NB.1.8.1 / PQ, scion of "razor-blade throat" XDV, push LP.8.1 out of majority.<br> <br><a href="https://hcommons.social/tags/CDC" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>CDC</span></a>'s most recent Friday dataset, updated Tuesday June 24, showed Nimbus taking plurality, with Stratus XFG family also gaining share.</p><p>Despite notice of moving to "longer reporting periods", for reason of "low number of sequences being reported" (see dot-hatching in below chart reflecting"less reliable" data), now three-weeks old dataset was still for periods two-weeks each.</p><p>❖ <a href="https://hcommons.social/tags/ThisIsOurPolio" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>ThisIsOurPolio</span></a> <a href="https://hcommons.social/tags/variants" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>variants</span></a> <a href="https://hcommons.social/tags/CovidIsNotOver" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>CovidIsNotOver</span></a> <a href="https://hcommons.social/tags/dataviz" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>dataviz</span></a> <a href="https://hcommons.social/tags/datavis" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>datavis</span></a></p>
sport of sacred spherical cows<p>Raj's dashboard, last updated July 3, showed PQ.2 as standout child of Nimbus NB.1.8.1 / PQ; Stratus XFG in competition with kids XFG.2 and XFG.3; and LP.8.1 long ago overshadowed by LP.8.1.1/ NY.</p><p>FDA vaccine target LP.8.1, dominant since March, plateaued in April. June saw Nimbus NB.1.8.1 / PQ, scion of "razor-blade throat" XDV, push LP.8.1 out of majority.<br> <br><a href="https://hcommons.social/tags/CDC" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>CDC</span></a>'s most recent Friday dataset, updated Tuesday June 24, showed Nimbus taking plurality, with Stratus XFG family also gaining share.</p><p>Despite notice of moving to "longer reporting periods", for reason of "low number of sequences being reported" (see dot-hatching in below chart reflecting"less reliable" data), now three-weeks old dataset was still for periods two-weeks each.</p><p>❖ <a href="https://hcommons.social/tags/ThisIsOurPolio" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>ThisIsOurPolio</span></a> <a href="https://hcommons.social/tags/variants" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>variants</span></a> <a href="https://hcommons.social/tags/CovidIsNotOver" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>CovidIsNotOver</span></a> <a href="https://hcommons.social/tags/dataviz" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>dataviz</span></a> <a href="https://hcommons.social/tags/datavis" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>datavis</span></a></p>
Replied in thread

FDA vaccine target LP.8.1, dominant since March, plateaued in April. June saw Nimbus NB.1.8.1 / PQ, scion of "razor-blade throat" XDV, push LP.8.1 out of majority.

#CDC's last Friday dataset, updated Tuesday this week, shows Nimbus taking plurality, with Stratus XFG family also gaining share. Despite notice of moving to "longer reporting periods", for reason of "low number of sequences being reported" (see dot-hatching in below chart reflecting"less reliable" data), current dataset was still for periods two-weeks each.

Raj's dashboard, updated Sunday, shows PQ.2 as standout child of Nimbus NB.1.8.1 / PQ; Stratus XFG in competition with kids XFG.2 and XFG.3; and LP.8.1 long ago overshadowed by LP.8.1.1/ NY.

#ThisIsOurPolio #variants #CovidIsNotOver #dataviz #datavis

As an editor in Journal of Open Source Software (JOSS), I'm looking for a reviewer for this interesting submission:
github.com/openjournals/joss-r

"k-diagram: Rethinking Forecasting Uncertainty via Polar-based Visualization"

If you know #Python #programming , are interested in #Visualization #datavis (especially of results from #forecasting ), ping me here or directly in the GitHub Issue ☝️

GitHub[PRE REVIEW]: k-diagram: Rethinking Forecasting Uncertainty via Polar-based Visualization · Issue #8190 · openjournals/joss-reviewsBy editorialbot
Replied in thread

FDA vaccine target LP.8.1, dominant since March, plateaued in April. June saw Nimbus NB.1.8.1 / PQ, scion of "razor-blade throat" XDV, push LP.8.1 out of majority.

Due to "low numbers of sequences being reported" (as evidenced by "less reliable" dot hatching on below chart), #CDC did not publish data this week, having advised only of "moving to longer reporting periods":

hcommons.social/@beadsland/114

Raj's dashboard, updated this morning, shows PQ.2 as standout child of Nimbus NB.1.8.1 / PQ; Stratus XFG in competition with kids XFG.2 and XFG.3; and LP.8.1 long ago overshadowed by LP.8.1.1/ NY.

#ThisIsOurPolio #variants #CovidIsNotOver #dataviz #datavis

Replied in thread

Just corrected major bug by changing one assignment.

Purpose of including inline bubble #datavis of GISAID data was to demonstrate how major subvariants, not broken out by the CDC, were being obscured by CDC bundling those subvariants into ancestor for reporting purposes.

Which is what these #dataviz would have been doing, if only they'd been using the actual share of the given ancestor to set the size of its bubble. Instead, of, well (*clears throat with embarrassment*) the total sum of shares of the root variant and its descendants.

Would say that this was down to my focusing so much attention on dynamic legend and family grouping logic, but that ignores time spent adjusting how bubbles were aligned within tiles.

So, really, it was just that never bothered to consistency check the bubbles as drawn against data as given, assuming without validating that everything was correct.

Anyway, charts going forward now work as intended, reflecting when #CDC data hides more than it reveals.

Replied in thread

FDA vaccine target LP.8.1, dominant since March, plateaued in April. June sees Nimbus NB.1.8.1, scion of "razor-blade throat" XDV, push LP.8.1 out of majority.

#CDC added NB.1.8.1 only in latest, late-published public dataset. Notice of "software error" that heralded data delay… has been removed. Hatching for "less reliable" data reflects "low numbers of sequences being reported".

Raj's dashboard, updated this morning, shows Nimbus diversifying in May. Also, XFJ significant, even if CDC hasn't broken out.

#ThisIsOurPolio #Covid #Covid19 #SARS2 #variants #CovidIsNotOver #CovidIsAirborne #dataviz #datavis

Replied in thread

Two weeks ago, Mike Honey noted that there are three recombinants that have arrived on Doppelgänger spike proteins, namely XFJ, XFM, and XFP:

aus.social/@mike_honey_/114611

Last week, Xu Zhu (HT D. Focosi) identified a superset of recombinants that have all arrived at a pairing of LF.7's NTD with RBD from elsewhere, namely: XFC, XFG, XFH, XFJ, XFM, XFN and XFP:

x.com/dfocosi/status/193135167

Above variants chart #AnnoPlot script is now updated to favor grouping by such emerging clusters preferentially over grouping by legacy ancestors.

As a reminder, recombinants happen when more than one virus strain is actively replicating in the same organism.

Here, that means two simultaneous infections, from different sources, finding a home in the same person.

When #PublicHealth is a priority, this should be a rare occurrence.

There are seven unique recombinants identified in this new cluster, alone.

#ThisIsOurPolio #Covid #Covid19 #SARS2 #variants #CovidIsNotOver #CovidIsAirborne #dataviz #datavis