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#reproducibility

3 posts3 participants1 post today
David Philip Morgan<p>Congratulations to <span class="h-card" translate="no"><a href="https://fediscience.org/@ElenLeFoll" class="u-url mention" rel="nofollow noopener" target="_blank">@<span>ElenLeFoll</span></a></span> and colleagues on joining the German Reproducibility Network! 🎊 </p><p>Great to see representation of the humanities in <a href="https://mastodon.world/tags/OpenScience" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>OpenScience</span></a> and <a href="https://mastodon.world/tags/Reproducibility" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>Reproducibility</span></a>, lots of great progress underway there - researchers <span class="h-card" translate="no"><a href="https://xn--baw-joa.social/@unimannheim" class="u-url mention" rel="nofollow noopener" target="_blank">@<span>unimannheim</span></a></span> should definitely check out the talks from this initiative! 💡</p><p><span class="h-card" translate="no"><a href="https://mastodon.world/@GermanRepro" class="u-url mention" rel="nofollow noopener" target="_blank">@<span>GermanRepro</span></a></span> <span class="h-card" translate="no"><a href="https://scicomm.xyz/@ReproducibiliTeaGlobal" class="u-url mention" rel="nofollow noopener" target="_blank">@<span>ReproducibiliTeaGlobal</span></a></span> <span class="h-card" translate="no"><a href="https://fediscience.org/@ElenLeFoll" class="u-url mention" rel="nofollow noopener" target="_blank">@<span>ElenLeFoll</span></a></span></p>
petersuber<p>Retractions and failures to replicate are signs of weak research. But they're also signs of laudable and necessary efforts to identify weak research and improve future research. The <a href="https://fediscience.org/tags/Trump" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>Trump</span></a> admin is systematically weaponizing these efforts to cast doubt on science as such. </p><p>"Research-integrity sleuths say their work is being ‘twisted’ to undermine science."<br><a href="https://www.nature.com/articles/d41586-025-02163-z" rel="nofollow noopener" translate="no" target="_blank"><span class="invisible">https://www.</span><span class="ellipsis">nature.com/articles/d41586-025</span><span class="invisible">-02163-z</span></a> </p><p><a href="https://fediscience.org/tags/DefendResearch" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>DefendResearch</span></a> <a href="https://fediscience.org/tags/Reproducibility" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>Reproducibility</span></a> <a href="https://fediscience.org/tags/Retractions" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>Retractions</span></a> <a href="https://fediscience.org/tags/Trump" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>Trump</span></a> <a href="https://fediscience.org/tags/TrumpVResearch" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>TrumpVResearch</span></a> <a href="https://fediscience.org/tags/USPol" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>USPol</span></a> <a href="https://fediscience.org/tags/USPolitics" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>USPolitics</span></a></p>
bladderbot<p><span class="h-card" translate="no"><a href="https://neuromatch.social/@elduvelle" class="u-url mention" rel="nofollow noopener" target="_blank">@<span>elduvelle</span></a></span> Sure - let’s add to the problem of reproducibility (retraction rates are already much higher for high-impact journals, incl. Nature – Brembs et al 2013 "Deep impact: unintended consequences of journal rank." Frontiers in human Neuroscience) by adding AI peer reviewers and watch academic publishing enshittify further. <a href="https://mastodon.online/tags/reproducibility" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>reproducibility</span></a> <a href="https://mastodon.online/tags/impactfactor" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>impactfactor</span></a> <a href="https://mastodon.online/tags/ScientificJournals" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>ScientificJournals</span></a></p>
Dorothy Bishop<p>This bluesky thread by Mark Hanson describes a massive project to look at <a href="https://mastodon.social/tags/reproducibility" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>reproducibility</span></a> of drosophila studies - I don't know much about that area, but the approach is pretty exciting and has potential for other topics. <a href="https://bsky.app/profile/hansonmark.bsky.social/post/3ltlvkkxyak2k" rel="nofollow noopener" translate="no" target="_blank"><span class="invisible">https://</span><span class="ellipsis">bsky.app/profile/hansonmark.bs</span><span class="invisible">ky.social/post/3ltlvkkxyak2k</span></a></p>
Björn Brembs<p>The killer quote! Prestigious institutions and prestigious journals drive irreproducibility in the life sciences - well, at least in this particular sample.</p><p><a href="https://www.biorxiv.org/content/10.1101/2025.07.07.663460v2" rel="nofollow noopener" translate="no" target="_blank"><span class="invisible">https://www.</span><span class="ellipsis">biorxiv.org/content/10.1101/20</span><span class="invisible">25.07.07.663460v2</span></a></p><p><a href="https://mastodon.social/tags/reproducibility" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>reproducibility</span></a> <a href="https://mastodon.social/tags/impactfactor" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>impactfactor</span></a></p>
Björn Brembs<p>And yet another one in the ever increasing list of analyses showing that top journals are bad for science:</p><p>"Thus, our analysis show major claims published in low-impact journals are significantly more likely to be reproducible than major claims published in trophy journals. "</p><p><a href="https://www.biorxiv.org/content/10.1101/2025.07.07.663460v2" rel="nofollow noopener" translate="no" target="_blank"><span class="invisible">https://www.</span><span class="ellipsis">biorxiv.org/content/10.1101/20</span><span class="invisible">25.07.07.663460v2</span></a></p><p><a href="https://mastodon.social/tags/publishing" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>publishing</span></a> <a href="https://mastodon.social/tags/openscience" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>openscience</span></a> <a href="https://mastodon.social/tags/reproducibility" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>reproducibility</span></a></p>
Björn Brembs<p>To my knowledge, first time that not only prestigious journals, but also prestigious institutions are implicated as major drivers of irreproducibility:</p><p>"Higher representation of challenged claims in trophy journals and from top universities"</p><p><a href="https://www.biorxiv.org/content/10.1101/2025.07.07.663460v2" rel="nofollow noopener" translate="no" target="_blank"><span class="invisible">https://www.</span><span class="ellipsis">biorxiv.org/content/10.1101/20</span><span class="invisible">25.07.07.663460v2</span></a></p><p><a href="https://mastodon.social/tags/reproducibility" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>reproducibility</span></a> <a href="https://mastodon.social/tags/openscience" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>openscience</span></a></p>
Pete Bachant<p>Tips for using Jupyter notebooks as part of a reproducible workflow (one that goes from raw data to research article with a single command): <a href="https://docs.calkit.org/notebooks" rel="nofollow noopener" translate="no" target="_blank"><span class="invisible">https://</span><span class="">docs.calkit.org/notebooks</span><span class="invisible"></span></a></p><p><a href="https://fediscience.org/tags/openscience" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>openscience</span></a> <a href="https://fediscience.org/tags/jupyter" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>jupyter</span></a> <a href="https://fediscience.org/tags/reproducibility" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>reproducibility</span></a></p>
UniversityofGroningenLibrary<p>We invite staff and students at the University of <a href="https://social.edu.nl/tags/Groningen" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>Groningen</span></a> to share how they are making <a href="https://social.edu.nl/tags/research" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>research</span></a> or <a href="https://social.edu.nl/tags/teaching" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>teaching</span></a> more open, accessible, transparent, or reproducible, for the 6th annual <a href="https://social.edu.nl/tags/OpenResearch" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>OpenResearch</span></a> Award. </p><p>Looking for inspiration?<br>Explore the case studies submitted in previous years:<br>🔗 <a href="https://www.rug.nl/research/openscience/open-research-award/previous-events" rel="nofollow noopener" translate="no" target="_blank"><span class="invisible">https://www.</span><span class="ellipsis">rug.nl/research/openscience/op</span><span class="invisible">en-research-award/previous-events</span></a></p><p>More info:<br>🔗 <a href="https://www.rug.nl/research/openscience/open-research-award/" rel="nofollow noopener" translate="no" target="_blank"><span class="invisible">https://www.</span><span class="ellipsis">rug.nl/research/openscience/op</span><span class="invisible">en-research-award/</span></a></p><p><a href="https://social.edu.nl/tags/OpenScience" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>OpenScience</span></a> <a href="https://social.edu.nl/tags/OpenEducation" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>OpenEducation</span></a> <a href="https://social.edu.nl/tags/OpenAccess" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>OpenAccess</span></a> <a href="https://social.edu.nl/tags/Reproducibility" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>Reproducibility</span></a> <br><span class="h-card" translate="no"><a href="https://mastodon.social/@oscgroningen" class="u-url mention" rel="nofollow noopener" target="_blank">@<span>oscgroningen</span></a></span></p>
Elen Le Foll 🇫🇷 🇬🇧 🇩🇪<p>Jack Taylor is now presenting a new <a href="https://fediscience.org/tags/Rstats" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>Rstats</span></a> package: "LexOPS: A Reproducible Solution to Stimuli Selection". Jack bravely did a live demonstration based on a German corpus ("because we're in Germany") that generated matched stimuli that certainly made the audience giggle... let's just say that one match involved the word "Erektion"... 😂 </p><p>There is a paper about the LexOPS package: <a href="https://link.springer.com/article/10.3758/s13428-020-01389-1" rel="nofollow noopener" translate="no" target="_blank"><span class="invisible">https://</span><span class="ellipsis">link.springer.com/article/10.3</span><span class="invisible">758/s13428-020-01389-1</span></a> and a detailed tutorial: <a href="https://jackedtaylor.github.io/LexOPSdocs/index.html" rel="nofollow noopener" translate="no" target="_blank"><span class="invisible">https://</span><span class="ellipsis">jackedtaylor.github.io/LexOPSd</span><span class="invisible">ocs/index.html</span></a>. Also a <a href="https://fediscience.org/tags/Shiny" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>Shiny</span></a> app for those who really don't want to use R, but that allows code download for <a href="https://fediscience.org/tags/reproducibility" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>reproducibility</span></a>: <a href="https://jackedtaylor.github.io/LexOPSdocs/" rel="nofollow noopener" translate="no" target="_blank"><span class="invisible">https://</span><span class="ellipsis">jackedtaylor.github.io/LexOPSd</span><span class="invisible">ocs/</span></a> Really cool and useful project! <a href="https://fediscience.org/tags/WoReLa1" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>WoReLa1</span></a> <a href="https://fediscience.org/tags/linguistics" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>linguistics</span></a> <a href="https://fediscience.org/tags/psycholinguistics" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>psycholinguistics</span></a></p>
OSTrails<p>At <a href="https://mastodon.social/tags/EGI2025" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>EGI2025</span></a>, OSTrails received the Best Poster Award for showcasing practical, cross-domain tools that support <a href="https://mastodon.social/tags/FAIR" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>FAIR</span></a>, open, and reproducible science.</p><p>Our contribution focused on making research workflows more efficient and researcher-centric, not more complex.</p><p>-Read our reflections and outcomes from the event: <a href="https://shorturl.at/nnfs0" rel="nofollow noopener" translate="no" target="_blank"><span class="invisible">https://</span><span class="">shorturl.at/nnfs0</span><span class="invisible"></span></a></p><p><a href="https://mastodon.social/tags/OpenScience" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>OpenScience</span></a> <a href="https://mastodon.social/tags/OSTrails" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>OSTrails</span></a> <a href="https://mastodon.social/tags/Reproducibility" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>Reproducibility</span></a> <a href="https://mastodon.social/tags/FAIRdata" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>FAIRdata</span></a> <a href="https://mastodon.social/tags/DMP" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>DMP</span></a> <a href="https://mastodon.social/tags/Metadata" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>Metadata</span></a> <a href="https://mastodon.social/tags/ResearchTools" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>ResearchTools</span></a> <a href="https://mastodon.social/tags/EOSC" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>EOSC</span></a> <a href="https://mastodon.social/tags/SciencePolicy" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>SciencePolicy</span></a></p>
Chloé Messdaghi<p>To ensure AI is genuinely open source, we must have complete access to:</p><p>1. The datasets used for its training and evaluation<br>2. The underlying code<br>3. The design of the model<br>4. The model's parameters</p><p>Without these elements, transparency and the ability to replicate results remain incomplete. </p><p><a href="https://infosec.exchange/tags/OpenSource" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>OpenSource</span></a> <a href="https://infosec.exchange/tags/AI" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>AI</span></a> <a href="https://infosec.exchange/tags/Transparency" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>Transparency</span></a> <a href="https://infosec.exchange/tags/Reproducibility" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>Reproducibility</span></a></p>
eLife<p>7/ Wei Mun Chan, Research Integrity Manager</p><p>With 10+ years in publishing and data curation, Wei Mun ensures every paper meets our high standards for ethics and <a href="https://fediscience.org/tags/reproducibility" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>reproducibility</span></a>. From image checks to data policies, he’s the quiet force keeping the scientific record trustworthy.</p>
Dutch Reproducibility Network<p>Are you an educator and wondering if and how to include <a href="https://mastodon.social/tags/preregistration" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>preregistration</span></a> into student assignments? Then join our <a href="https://mastodon.social/tags/webinar" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>webinar</span></a> and learn from our speakers! </p><p>🗓️ 26 June<br>⌚ 13:30 -15 hrs <br>register here:<br><a href="https://events.teams.microsoft.com/event/d5795f72-3c31-4962-97f7-62911cffc909@335122f9-d4f4-4d67-a2fc-cd6dc20dde70" rel="nofollow noopener" translate="no" target="_blank"><span class="invisible">https://</span><span class="ellipsis">events.teams.microsoft.com/eve</span><span class="invisible">nt/d5795f72-3c31-4962-97f7-62911cffc909@335122f9-d4f4-4d67-a2fc-cd6dc20dde70</span></a> </p><p>Ewout Meijer from Maastricht University and Elen Le Foll from the University of Cologne will share their experiences with having students preregister their term papers and theses work. </p><p>We will make a recording of the webinar available.<br><a href="https://mastodon.social/tags/openScience" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>openScience</span></a> <a href="https://mastodon.social/tags/reproducibility" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>reproducibility</span></a></p>
Nick Byrd, Ph.D.<p><a href="https://nerdculture.de/tags/Checklists" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>Checklists</span></a> have massive benefit in <a href="https://nerdculture.de/tags/aviation" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>aviation</span></a>, <a href="https://nerdculture.de/tags/engineering" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>engineering</span></a>, and <a href="https://nerdculture.de/tags/medicine" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>medicine</span></a>.</p><p>Now <a href="https://nerdculture.de/tags/cognitiveScience" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>cognitiveScience</span></a> has a list of 51 simple yes-no questions (from experts around the world) to design and assess <a href="https://nerdculture.de/tags/research" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>research</span></a> — its quality, <a href="https://nerdculture.de/tags/reproducibility" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>reproducibility</span></a>, etc.</p><p><a href="https://doi.org/10.3758/s13428-025-02705-3" rel="nofollow noopener" translate="no" target="_blank"><span class="invisible">https://</span><span class="ellipsis">doi.org/10.3758/s13428-025-027</span><span class="invisible">05-3</span></a></p><p><a href="https://nerdculture.de/tags/philSci" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>philSci</span></a> <a href="https://nerdculture.de/tags/edu" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>edu</span></a></p>
Recherche reproductible France<p>Rejoignez nous !<br>Une super occasion de contribuer à une science plus ouverte, de collaborer et de mieux comprendre les défis de la reproductibilité.<br>📅 3 octobre 2025<br>📍 INRIA Paris<br><a href="https://piaille.fr/tags/ReplicationGames" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>ReplicationGames</span></a> <a href="https://piaille.fr/tags/Reproducibility" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>Reproducibility</span></a> <a href="https://piaille.fr/tags/ScienceOuverte" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>ScienceOuverte</span></a> <a href="https://piaille.fr/tags/I4R" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>I4R</span></a> <a href="https://piaille.fr/tags/RFRR" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>RFRR</span></a></p>
Peer Community In<p>Here is how PCI is elevating the standards for open and reproducible science: introducing 4 already-existing and 2 new features 🧵👇 <a class="hashtag" rel="nofollow noopener" href="https://bsky.app/search?q=%23OpenScience" target="_blank">#OpenScience</a> <a class="hashtag" rel="nofollow noopener" href="https://bsky.app/search?q=%23Reproducibility" target="_blank">#Reproducibility</a></p>
Peer Community In<p>Here is how PCI is elevating the standards for open and reproducible science: introducing 4 already-existing and 2 new features 🧵👇<br><a href="https://ecoevo.social/tags/OpenScience" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>OpenScience</span></a> <a href="https://ecoevo.social/tags/Reproducibility" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>Reproducibility</span></a></p>
toscalix<p>Introduction to <span class="h-card" translate="no"><a href="https://mstdn.social/@swheritage" class="u-url mention" rel="nofollow noopener" target="_blank">@<span>swheritage</span></a></span> for software developers, in Spanish <a href="https://www.youtube.com/watch?v=Pilimdyr5Ac" rel="nofollow noopener" translate="no" target="_blank"><span class="invisible">https://www.</span><span class="">youtube.com/watch?v=Pilimdyr5Ac</span><span class="invisible"></span></a> at <span class="h-card" translate="no"><a href="https://hachyderm.io/@commitconf" class="u-url mention" rel="nofollow noopener" target="_blank">@<span>commitconf</span></a></span> </p><p><a href="https://mastodon.social/tags/openscience" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>openscience</span></a> <a href="https://mastodon.social/tags/provenance" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>provenance</span></a> <a href="https://mastodon.social/tags/reproducibility" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>reproducibility</span></a></p>
Miguel Colom<p>My proposed <a href="https://mastodon.social/tags/tutorial" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>tutorial</span></a> "From your source code to a reproducible online demonstration" has been accepted in <a href="https://mastodon.social/tags/ACMRep" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>ACMRep</span></a> 2025! If you're around, don't hesitate to join, or to follow online otherwise! <a href="https://acm-rep.github.io/2025/" rel="nofollow noopener" translate="no" target="_blank"><span class="invisible">https://</span><span class="">acm-rep.github.io/2025/</span><span class="invisible"></span></a></p><p><a href="https://mastodon.social/tags/reproducibility" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>reproducibility</span></a> <a href="https://mastodon.social/tags/research" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>research</span></a> <a href="https://mastodon.social/tags/ACM" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>ACM</span></a></p>
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